PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv1_015850_kant.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 281aa    MW: 30486.8 Da    PI: 6.9544
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv1_015850_kant.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH53.54.4e-17115161455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          hn+ E+rRR+riN+++  L++l+P++      K +Ka++L +A++Y+k+Lq
  Bv1_015850_kant.t1 115 VHNMSEKRRRQRINEKMKALQKLIPNS-----SKTDKASMLDEAIDYLKQLQ 161
                         6*************************8.....7******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.32E-18105165No hitNo description
Gene3DG3DSA:4.10.280.104.5E-20108171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.98E-21108173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088818.514111160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-14115161IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.2E-19117166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MADLSPPETS SDDISSLLHN LLHSSSQPST STTTTTNHHQ PPPTPPDNSR QFPGSALISE  60
VSTLLDPNFH FAGAYYSSSL SMETIHDADC QSEDETRVKS ASGRSSSKRT RAAEVHNMSE  120
KRRRQRINEK MKALQKLIPN SSKTDKASML DEAIDYLKQL QLQVQMLTMR NGSSAVPFNL  180
TGAIQPPSAG PLDEANSSKV GSFAADQEAS MEATFNLSSK PAFSDYRLMM TKLSENNSGQ  240
AYVPEPSMTV HYKPFSASMS SKARCKDTSY CGQSSSSGVS S
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010688822.10.0PREDICTED: transcription factor ALC-like
SwissprotQ9FUA41e-33SPT_ARATH; Transcription factor SPATULA
TrEMBLA0A0J8D4V40.0A0A0J8D4V4_BETVU; Uncharacterized protein
STRINGVIT_18s0001g10270.t012e-45(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.15e-35bHLH family protein